SlicerHeart extension contains tools for cardiac image import (3D/4D ultrasound, CT, MRI), quantification, surgical planning, and implant placement planning and assessment.
SlicerHeart 擴展包含用於心臟影像導入（3D/4D 超聲波、CT、MRI）、量化、手術規劃以及植入物放置規劃和評估的工具。
The extension currently includes the following features (new features are added continuously):
擴展目前包括以下功能（新功能持續添加）：
- Cardiac image import and export:
心臟影像的導入和導出：- DICOM ultrasound image importer plugins: they allow loading Philips Affinity 3D ultrasound images, GE 3D ultrasound images and 2D image sequences, Eigen Artemis 3D ultrasound images, and some Siemens, Samsung, Canon, and Hitachi 3D ultrasound images.
DICOM 超聲波影像導入插件：它們允許加載 Philips Affinity 3D 超聲波影像、GE 3D 超聲波影像和 2D 影像序列、Eigen Artemis 3D 超聲波影像，以及一些 Siemens、Samsung、Canon 和 Hitachi 3D 超聲波影像。 - Philips 4D US DICOM patcher: Cartesian 4D echo images exported by Philips QLAB are not valid DICOM files. This module fixes the files and makes them loadable into 3D Slicer.
Philips 4D US DICOM 修補程式：由 Philips QLAB 匯出的 Cartesian 4D echo 影像並非有效的 DICOM 檔案。此模組修復這些檔案，使其可載入到 3D Slicer 中。 - Reconstruct 4D cine-MRI: Reconstruct sequence of Cartesian volumes from a sparse set of cine-MRI frames.
重建 4D 影片-MRI：從稀疏的 cine-MRI 幀集合中重建一系列笛卡爾體積。 - Carto Export: export models to to be used in Carto EP mapping systems.
Carto Export：將模型匯出以供在 Carto EP 地圖系統中使用。 - TomTec UCD data file importer: allows loading *.UCD.data.zip file as a model sequence. When drag-and-dropping the zip file to the application window, then choose "No" to the question "The selected file is a zip archive, open it and load contents" and then click OK in the displayed "Add data..." window.
TomTec UCD 數據文件導入器：允許將*.UCD.data.zip 文件作為模型序列加載。將 zip 文件拖放到應用程序窗口時，然後選擇“否”回答問題“所選文件是壓縮檔，是否打開並加載內容”，然後在顯示的“添加數據…”窗口中點擊確定。
- DICOM ultrasound image importer plugins: they allow loading Philips Affinity 3D ultrasound images, GE 3D ultrasound images and 2D image sequences, Eigen Artemis 3D ultrasound images, and some Siemens, Samsung, Canon, and Hitachi 3D ultrasound images.
- Cardiac image visualization:
心臟影像視覺化:- Echo Volume Render: module for display of 3D/4D cardiac ultrasound images with distance-dependent coloring.
Echo Volume Render: 用於顯示具有距離依賴性著色的 3D/4D 心臟超聲波圖像的模組。 - Valve View: module for visualization of heart valves: allows reslicing the volume using two rotating orthogonal planes. This feature is mainly for Slicer-4.10, as in Slicer-4.11 and later, this feature is built into Slicer core (enable slice intersections and Ctrl/Cmd + Alt + Left-click-and drag to rotate slice view).
Valve View：用於心臟瓣膜可視化的模組：允許使用兩個旋轉的正交平面對體積進行重新切片。此功能主要用於 Slicer-4.10，因為在 Slicer-4.11 及以後版本，此功能已內建於 Slicer 核心（啟用切片交叉點並按 Ctrl/Cmd + Alt +左鍵單擊並拖動以旋轉切片視圖）。
- Echo Volume Render: module for display of 3D/4D cardiac ultrasound images with distance-dependent coloring.
- Quantification:
量化：
- Valve annulus analysis: specify basic heart valve properties and annulus contour.
閥環分析：指定基本心臟瓣膜特性和環輪輪廓。 - Valve segmentation: module for volumetric segmentation of heart valves.
閥門分割：用於心臟瓣膜體積分割的模組。 - Leaflet analysis: create valve leaflet surface models from volmetric valve segmentation.
Leaflet 分析：從體積閥分割創建閥葉表面模型。 - Valve papillary analysis: allow specify papillary muscles and chords to compute angles and lengths.
瓣膜乳头肌分析：允许指定乳头肌和弦来计算角度和长度。 - Valve quantification: automatic computation heart valve annulus, leaflet, and papillary metrics
閥門量化：自動計算心臟瓣膜環、瓣膜和梵帕利指標 - Valve batch export: run valve quantification and export results for a large cohort of data.
Valve 批次匯出：運行 Valve 量化並匯出大量數據的結果。 - Orifice area: measure cross-sectional area of openings in a model, for example to quantify regurgitant orifice area.
開口面積：測量模型中開口的橫截面積，例如用於量化反流孔面積。 - Annulus Shape Analyzer: make population-wise observations on dynamic annular shape.
環形形狀分析器：對動態環形形狀進行人口層面觀察。 - Fluoro Flow Calculator: measuring Qp-split using readily available fluoroscopy sequences.
Fluoro Flow Calculator：使用現有的螢光攝影序列測量 Qp-split。
- Valve annulus analysis: specify basic heart valve properties and annulus contour.
- Implant placement planning and assessment:
植入物放置規劃和評估:- Cardiac Device Simulator: module for evaluating placement of cardiac implants. Shows all cardiac device models (Harmony device, generic cylindrical device, various ASD/VSD devices) and all available analysis tools.
心臟裝置模擬器：用於評估心臟植入物放置的模組。顯示所有心臟裝置模型（Harmony 裝置、通用圓柱裝置、各種 ASD/VSD 裝置）和所有可用的分析工具。 - ASD/VSD Device Simulator: cardiac device simulator for ASD/VSD device placement analysis.
ASD/VSD 裝置模擬器：用於 ASD/VSD 裝置放置分析的心臟裝置模擬器。 - TCAV Valve Simulator TCAV 閥門模擬器
- ValveClip Device Simulator
閥夾裝置模擬器 - Leaflet Mold Generator: tool for automatic generation of 3D-printable molds for making simulated valves out of silicone.
Leaflet Mold Generator：用於自動生成可供 3D 列印的模具，用於製作矽膠模擬閥門的工具。
- Cardiac Device Simulator: module for evaluating placement of cardiac implants. Shows all cardiac device models (Harmony device, generic cylindrical device, various ASD/VSD devices) and all available analysis tools.
- Surgical planning:
手術計劃：
- Baffle planner: modeling tool for virtual planning of intracardiac baffle - or any other thin curved surfaces in any clinical specialties (for example, cranial flaps).
Baffle planner：用於虛擬規劃心內隔板或任何其他薄曲面的建模工具，適用於任何臨床專業領域（例如，頭蓋瓣）。
- Baffle planner: modeling tool for virtual planning of intracardiac baffle - or any other thin curved surfaces in any clinical specialties (for example, cranial flaps).
- Electrophysiology:
電生理學:
- EA Map Reader: read electroanatomical maps from NavX, Carto3, or Rhythmia mapping systems
EA 地圖閱讀器：從 NavX、Carto3 或 Rhythmia 映射系統讀取電解解剖地圖
- EA Map Reader: read electroanatomical maps from NavX, Carto3, or Rhythmia mapping systems
- Download and install 3D Slicer from http://download.slicer.org/
從 http://download.slicer.org/ 下載並安裝 3D Slicer - Start Slicer, in the Extension manager install SlicerHeart extension (in Cardiac category), click Yes to install all dependencies, click Restart
啟動 Slicer，在擴展管理器中安裝 SlicerHeart 擴展（在心臟類別中），點擊是以安裝所有依賴項，然後點擊重新啟動
If you have any questions about installing or using SlicerHeart modules please post it on the Slicer forum.
如果您對安裝或使用 SlicerHeart 模組有任何問題，請在 Slicer 論壇上發表。
- Authors: Matthew Jolley (CHOP/UPenn), Andras Lasso (PerkLab, Queen's University), Christian Herz (CHOP), Csaba Pinter (Pixel Medical), Anna Ilina (PerkLab, Queen's University), Steve Pieper (Isomics), Adam Rankin (Robarts)
作者：Matthew Jolley（CHOP/UPenn）、Andras Lasso（PerkLab，皇后大學）、Christian Herz（CHOP）、Csaba Pinter（Pixel Medical）、Anna Ilina（PerkLab，皇后大學）、Steve Pieper（Isomics）、Adam Rankin（Robarts） - Contacts:
聯絡人:
- Matthew Jolley, jolleym@email.chop.edu
Matthew Jolley，jolleym@email.chop.edu - Andras Lasso, lasso@queensu.ca
- Matthew Jolley, jolleym@email.chop.edu
- License: BSD 3-Clause License
許可證：BSD 3-Clause 許可證
If you utilized SlicerHeart, please cite the following paper when referring to SlicerHeart in your publication:
如果您使用了 SlicerHeart，请在您的出版物中提及 SlicerHeart 時引用以下論文:
Lasso, A., Herz, C., Nam, H., Cianciulli, A., Pieper, S., Drouin, S., Pinter, C., St-Onge, S., Vigil, C., Ching, S., Sunderland, K., Fichtinger, G., Kikinis, R., & Jolley, M. A. (2022). "SlicerHeart: An open-source computing platform for cardiac image analysis and modeling." Frontiers in Cardiovascular Medicine, 9. https://doi.org/10.3389/fcvm.2022.886549
- Full-text pdf: https://www.frontiersin.org/articles/10.3389/fcvm.2022.886549/pdf
全文 PDF：https://www.frontiersin.org/articles/10.3389/fcvm.2022.886549/pdf - URL: https://www.frontiersin.org/articles/10.3389/fcvm.2022.886549
- DOI: 10.3389/fcvm.2022.886549
DOI：10.3389/fcvm.2022.886549 - ISSN: 2297-055X
- bibtex:
@ARTICLE{Lasso2022,
title = "{SlicerHeart}: An open-source computing platform for cardiac
image analysis and modeling",
author = "Lasso, Andras and Herz, Christian and Nam, Hannah and
Cianciulli, Alana and Pieper, Steve and Drouin, Simon and
Pinter, Csaba and St-Onge, Samuelle and Vigil, Chad and Ching,
Stephen and Sunderland, Kyle and Fichtinger, Gabor and Kikinis,
Ron and Jolley, Matthew A",
journal = "Frontiers in Cardiovascular Medicine",
publisher = "Frontiers Media SA",
volume = 9,
month = sep,
year = 2022,
copyright = "https://creativecommons.org/licenses/by/4.0/"
}
This work was partially supported by:
這項工作部分得到以下支持：
- Department of Anesthesia and Critical Care at The Children’s Hospital of Philadelphia(CHOP)
費城兒童醫院(CHOP)麻醉與重症護理部門 - The Cora Topolewski Fund at the Children's Hospital of Philadelphia
費城兒童醫院的 Cora Topolewski 基金 - CHOP Frontier Grant (Pediatric Valve Center)
CHOP 前沿基金（兒童心臟瓣膜中心） - National Heart, Blood, and Lung Institute (NHLBI) (R01 HL153166)
國家心臟、血液和肺研究所（NHLBI）（R01 HL153166） - National Institute of Biomedical Imaging and Bioengineering (NIBIB) (P41 EB015902)
國家生物醫學影像與生物工程研究所（NIBIB）（P41 EB015902） - Cancer Care Ontario with funds provided by the Ontario Ministry of Health and Long-Term Care
由安大略省衛生及長期護理部提供資金支持的安大略省癌症護理局 - Natural Sciences and Engineering Research Council of Canada
加拿大自然科學和工程研究委員會 - Big Hearts to Little Hearts
- Children’s Hospital of Philadelphia Cardiac Center Innovation Fund
- National Cancer Institute (NCI) (contract number 19X037Q from Leidos Biomedical Research under Task Order HHSN26100071 from NCI, funding development of NCI Imaging Data Commons)